From 3f8b74c04207494b5bb29058466dcc20cdd59c22 Mon Sep 17 00:00:00 2001 From: Tim Dudgeon Date: Mon, 20 Jul 2026 09:49:32 +0100 Subject: [PATCH] fix: rename minValue/maxValue to minimum/maximum in moldb.yaml The job-definition schema only accepts minimum/maximum, not minValue/maxValue. #14 renamed these everywhere else but missed moldb.yaml, which meant jote couldn't even parse this manifest (schema validation failed before any test could be discovered). Verified with jote --manifest data-manager/manifest-moldb.yaml --dry-run: now finds and dry-run-passes all 12 tests. Co-Authored-By: Claude Sonnet 5 --- data-manager/moldb.yaml | 26 +++++++++++++------------- 1 file changed, 13 insertions(+), 13 deletions(-) diff --git a/data-manager/moldb.yaml b/data-manager/moldb.yaml index f33bccd..3d8c270 100644 --- a/data-manager/moldb.yaml +++ b/data-manager/moldb.yaml @@ -271,8 +271,8 @@ jobs: title: Chunk size for splitting type: integer default: 100000 - minValue: 10000 - maxValue: 1000000 + minimum: 10000 + maximum: 1000000 tests: simple-load: nextflow-config-file: nextflow-moldb.config @@ -352,13 +352,13 @@ jobs: title: Max number of molecules to process type: integer default: 1000000 - maxValue: 5000000 + maximum: 5000000 chunk_size: title: Chunk size for splitting type: integer default: 50000 - minValue: 10000 - maxValue: 1000000 + minimum: 10000 + maximum: 1000000 tests: simple-calc: nextflow-config-file: nextflow-moldb.config @@ -451,13 +451,13 @@ jobs: title: Max number of molecules to process type: integer default: 100000 - maxValue: 5000000 + maximum: 5000000 chunk_size: title: Chunk size for splitting type: integer default: 10000 - minValue: 10000 - maxValue: 1000000 + minimum: 10000 + maximum: 1000000 tests: simple-enum: nextflow-config-file: nextflow-moldb.config @@ -549,13 +549,13 @@ jobs: title: Max number of molecules to process type: integer default: 100000 - maxValue: 5000000 + maximum: 5000000 chunk_size: title: Chunk size for splitting type: integer default: 10000 - minValue: 10000 - maxValue: 1000000 + minimum: 10000 + maximum: 1000000 tests: simple-confs: nextflow-config-file: nextflow-moldb.config @@ -768,7 +768,7 @@ jobs: title: Max number of molecules to extract type: integer default: 100000 - maxValue: 5000000 + maximum: 5000000 incl_taut: title: Include tautomers type: boolean @@ -897,7 +897,7 @@ jobs: title: Max number of molecules to extract type: integer default: 100000 - maxValue: 5000000 + maximum: 5000000 incl_taut: title: Include tautomers type: boolean