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Pull requests: nf-core/methylseq

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Pull requests list

fix: quote env() outputs in RASTAIR_MBIASPARSER for Nextflow strict parser
#618 opened Jul 19, 2026 by FelixKrueger Contributor Loading…
3 tasks done
Update Trim Galore to v2.3.0 (Rust rewrite)
#617 opened Jul 18, 2026 by FelixKrueger Contributor Loading…
Add opt-in Bismark combined-index alignment (--combined_index)
#616 opened Jul 18, 2026 by FelixKrueger Contributor Loading…
Add methurator tool
#609 opened Jun 14, 2026 by edogiuili Loading…
8 of 11 tasks
Important! Template update for nf-core/tools v4.0.2
#606 opened Apr 30, 2026 by nf-core-bot Member Loading…
refactor: migrate to nf-core-utils plugin
#598 opened Mar 11, 2026 by edmundmiller Collaborator Loading…
1 of 4 tasks
Preview: Record types
#593 opened Jan 13, 2026 by bentsherman Draft
3 tasks done
Add fq2bam to methylseq
#592 opened Dec 18, 2025 by eduard-watchmaker Contributor Loading…
11 tasks
ci: Try new launch action
#560 opened Aug 8, 2025 by edmundmiller Collaborator Draft
Support for NuGen Ovation RRBS libraries stale Will eventually be closed due to divergence and compatibility issues. WIP Work in progress
#379 opened Feb 14, 2024 by jma1991 Loading…
5 of 11 tasks
Add Biscuit stale Will eventually be closed due to divergence and compatibility issues. WIP Work in progress
#295 opened Jan 20, 2023 by njspix Contributor Loading…
4 of 9 tasks
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